Univariate and multivariate family-based association analysis of the IL-13 ARG130GLN polymorphism in the Childhood Asthma Management Program

Genet Epidemiol. 2002 Nov;23(4):335-48. doi: 10.1002/gepi.10182.

Abstract

Interleukin 13 (IL-13) has been demonstrated to have a crucial role in animal models of allergy and asthma. In human case-control genetic-association studies, the Arg130Gln polymorphism has been associated with elevated total serum IgE and an asthma diagnosis in atopic and nonatopic individuals (Graves et al. [2000] J. Allergy Clin. Immunol. 105:506-513; Heinzmann et al. [2000] Hum. Mol. Genet. 9:549-559). To apply family-based association methods, we obtained DNA samples from 685 asthmatic children from 640 sibships and their parents in the Childhood Asthma Management Program (CAMP). Six hundred and sixty-six asthmatic children had complete phenotypic information and were used for this analysis. We performed quantitative association analysis using the transmission disequilibrium test (TDT) on 22 individual phenotypes and 5 grouped phenotypes relating to allergy, airway responsiveness, pulmonary function, bronchodilator responsiveness, and asthma severity, using genotypes at the Arg130Gln polymorphism of the IL-13 gene. A positive association was obtained between Arg130Gln and a grouped phenotype of allergy (consisting of the individual phenotypes of eosinophils, IgE, and positive skin tests), using FBAT-GEE, a multivariate extension of the family-based association test (Lange et al. [2002] Biostatistics 1:1-15). The three phenotypes were then evaluated individually and revealed a significant association between total eosinophil count and the Arg130Gln locus; there was a trend for association between total IgE and the Arg130Gln polymorphism. The Arg130Gln polymorphism is associated with an elevated eosinophil count as well as with a grouped allergy phenotype, in children with mild to moderate asthma. No evidence for association was found between Arg130Gln and airway responsiveness, asthma diagnosis, or asthma severity.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Allergens / immunology
  • Asthma / genetics*
  • Asthma / immunology
  • Chi-Square Distribution
  • Child
  • DNA / analysis
  • Eosinophils
  • Female
  • Genotype
  • Humans
  • Immunoglobulin E / genetics
  • Immunoglobulin E / immunology
  • Interleukin-13 / genetics*
  • Interleukin-13 / immunology
  • Linkage Disequilibrium
  • Male
  • Nuclear Family
  • Phenotype
  • Polymerase Chain Reaction
  • Polymorphism, Genetic*
  • Respiratory Function Tests
  • Severity of Illness Index

Substances

  • Allergens
  • Interleukin-13
  • Immunoglobulin E
  • DNA