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Hypermethylation of the promoter region of the E-cadherin gene (CDH1) in sporadic and ulcerative colitis associated colorectal cancer

Abstract

BACKGROUND Ulcerative colitis associated colorectal cancer (UCACRC) has several distinctive clinicopathological and genetic features which differ from sporadic colorectal cancer (SCRC). Hypermethylation of the E-cadherin gene (CDH1) has not been described previously in colorectal cancer.

AIMS A panel of SCRC and UCACRC were investigated for mutations inCDH1, and for hypermethylation of the promoter region of CDH1.

SUBJECTS AND METHODS DNA was available from 14 patients with UCACRC and from 14 with SCRC. All exons ofCDH1 were amplified with the polymerase chain reaction (PCR) and screened using single strand conformational polymorphism and direct sequencing. Hypermethylation of theCDH1 promoter region was determined by methylation specific PCR following bisulphite modification, and compared with E-cadherin protein expression from a previous immunohistochemistry study.

RESULTS Thirteen of 28 cancers (46%) were hypermethylated in theCDH1 promoter region—eight cancers (57%) in the UCACRC group and five cancers (36%) in the SCRC group (NS)—and this correlated with reduced E-cadherin expression (p<0.05). There was a trend for methylation to be associated with a more advanced stage of cancer although this did not reach statistical significance. There were no mutations in CDH1 in either group although there were several polymorphisms.

CONCLUSION We have demonstrated hypermethylation of the promoter region inCDH1 in 46% of colorectal cancers studied. There was no difference between the UCACRC and SCRC groups. Just as there are specific differences in the genetic changes between UCACRC and SCRC, there is also likely to be a large degree of overlap among the genetic pathways of these cancers.

  • hypermethylation
  • promoter region
  • E-cadherin (CDH1)
  • ulcerative colitis
  • colorectal cancer
  • Abbreviations used in this paper

    UCACRC
    ulcerative colitis associated colorectal cancer
    SCRC
    sporadic colorectal cancer
    RER
    replication error
    PCR
    polymerase chain reaction
    SSCP
    single strand conformational polymorphism
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  • Abbreviations used in this paper

    UCACRC
    ulcerative colitis associated colorectal cancer
    SCRC
    sporadic colorectal cancer
    RER
    replication error
    PCR
    polymerase chain reaction
    SSCP
    single strand conformational polymorphism
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