JHP1132 | HP27 | Ca1506 | 1715 | |
Variant | 2B | 2C | 2D | 2D' |
Amino acids (n) | 59 | 59 | 94 | 95 |
Cysteine (%)1-151 | 0 | 0 | 0 | 1 |
Proline (%)1-151 | 0 | 0 | 0 | 0 |
Topology: N terminus | “in” | “in” | “in” | “in” |
Topology: C terminus | ? | ? | ? | ? |
TopPred | ||||
PTM (n) | None | None | One | One |
Position‡(score) | 58–78 (0.758) | 23–41 (0.615) | ||
DAS | ||||
PTM (n) | None | One | Two | Two |
Position | 32–41 | 37–40, 66–75 | 31–41, 70–76 | |
Helix (%)1-151 | 11.7 | 0.0 | 0.0 | 0.0 |
Sheet (%)1-151 | 41.7 | 62.7 | 72.3 | 54.2 |
Other (%)1-151 | 46.7 | 37.3 | 27.7 | 45.8 |
Class1-151 | Mixed | All-beta | All-beta | All-beta |
?, not determined; Position‡, amino acid position;
↵1-151 from JPRED.
“in”, orientation inside cell membrane; PTM, putative transmembrane segment; DAS, dense alignment sequence.