Oligonucleotide probes used in this study
| Phylogenetic group* | Probe | Sequence (5`-3`) | Name† | Reference |
|---|---|---|---|---|
| *Name of the phylogenetic group used in this study. | ||||
| †Probe names in accordance with the Oligonucleotide Probe Database. | ||||
| Universal | Univ1390 | - GACGGGCGGTGTGTACAA - | S-*-Univ-1390-a-A-18 | Zheng13 |
| Bacteria | Eub338 | - GCTGCCTCCCGTAGGAGT - | S-D-Bact-0338-a-A-18 | Amann18 |
| Clostridium coccoides | Erec482 | - GCTTCTTAGTCA(A/G)GTACCG - | S-*-Erec-0482-a-A-19 | Franks19 |
| Clostridium leptum | Clept1240 | - GTTTT(A/G)TCAACGGCAGTC - | S-G-Clept-1240-a-A-18 | Sghir20 |
| Bacteroides-Porphyromonas-Prevotella | Bacto1080 | - GCACTTAAGCCGACACCT - | S-*-Bacto-1080-a-A-18 | Doré11 |
| Bifidobacterium | Bif228 | - GATAGGACGCGACCCCAT - | S-G-Bif-228-a-A-18 | Mangin21 |
| Enterobacteria | Enter1418 | - CTTTTGCAACCCACT - | S-G-Enter-1418-a-A-15 | Chmieliewski et al, submitted |
| Lactobacillus-Streptococcus-Enterococcus | Lacto722 | - YCACCGCTACACATGRAGTTCCACT - | S-G-Lacto-0722-a-A-25 | Sghir22 |