Primers used for sequence specific polymerase chain reaction
| Polymorphism | Specificity | Amplicon size (bp) | Sense primer | Antisense primer |
|---|---|---|---|---|
| 5q31 | ||||
| IGR2060a_1 | C | 218 | ggTgCAgCCTggAgCTC | AgCTCAgTCATTACCTTTgCg |
| G | 218 | ggTgCAgCCTggAgCTC | AgCTCAgTCATTACCTTTgCC | |
| IGR2198a_1 | G | 212 | ATCTCTTCAgTAGACgAACg | CATgAAgAAgggACATAACC |
| C | 212 | ATCTCTTCAgTAGACgAACC | CATgAAgAAgggACATAACC | |
| IGR3096a_1 | C | 291 | CCCAAACATCCTggAgAAC | gCgCCTTCCTAATTCATCC |
| T | 291 | CCCAAACATCCTggAgAAT | gCgCCTTCCTAATTCATCC | |
| NOD2/CARD15 | ||||
| R702W | C | 278 | TgAgAAggCCCTgCTCC | AgAgTTgTAgTCCAgCTgCAg |
| T | 278 | CTgAgAAggCCCTgCTCT | AgAgTTgTAgTCCAgCTgCAg | |
| G908R | G | 242 | ggCCTTTTCAgATTCTggg | gACATTTCCAAgTCACCCAg |
| C | 242 | ggCCTTTTCAgATTCTggC | gACATTTCCAAgTCACCCAg | |
| 1007fsinsC | — | 377 | CCCTCCTgCAggCCCT | AACCgCAgAAggTCTgATC |
| Cins | 378 | CCCTCCTgCAggCCCC | AACCgCAgAAggTCTgATC | |