Table 4 List of the 58 genes studied
Interferon signalling pathway:
IRF7Interferon regulatory factor 7
ISGF3GInterferon-stimulated transcription factor 3, gamma 48 kDa
STAT1Signal transducer and activator of transcription 1
STAT2Signal transducer and activator of transcription 2
Interferon-inducible proteins:
ISG15Interferon alpha-inducible protein 2 (clone IFI -15K)
IFI-6-16Interferon alpha-inducible protein 3 (clone IFI-6-16)
IFI27Interferon alpha-inducible protein 27
IFI35Interferon alpha-inducible protein 35
IFIT1Interferon-induced protein with tetratricopeptide repeats 1
IFIT4Interferon-induced protein with tetratricopeptide repeats 4
IFITM1Interferon-induced transmembrane protein 1
LGALS3BPLectin galactoside-binding soluble 3
MX1Myxovirus (influenza virus) resistance 1
OAS12′-5′-Oligoadenylate synthetase 1
OAS22′-5′-Oligoadenylate synthetase 2
OAS32′-5′-Oligoadenylate synthetase 3
PLSCR1Phospholipid scramblase 1
PRKRProtein kinase IFN-inducible double-stranded RNA dpt
PSMB9Proteasome (prosome, macroprain) subunit beta type 9
HERC5Hect domain and RLD 5
RSAD2Radical S-adenosyl methionine domain-containing 2
Growth factor receptors:
CXCR3Chemokine (C-X-C motif) receptor 3
Growth factors; chemokines; interleukins:
CXCL6Chemokine (C-X-C motif) ligand 6 (GCP-2)
CCL8Chemokine (C-C motif) ligand 8 (MCP-2)
CXCL9Chemokine (C-X-C motif) ligand 9 (MIG)
CXCL10Chemokine (C-X-C motif) ligand 10 (IP-10)
CXCL11Chemokine (C-X-C motif) ligand 11 (IP-9)
FGF7Fibroblast growth factor 7 (FGF)
IFNGInterferon, gamma
IL6Interleukin 6
IL8Interleukin 8
IL10Interleukin 10
MDKMidkine (NEGF2)
TGFB2Transforming growth factor beta 2
TNFTumour necrosis factor
TSLPThymic stromal lymphopoeitin
Signal transduction:
DUSP1Dual specificity phosphatase 1 (MKP-1)
EEF1GEukaryotic translation elongation factor 1 g
Cell cycle:
CDKN2ACDK inhibitor 2A (p16 protein)
SFNStratifin (protein 14-3-3 sigma)
Transcription factors:
ATF5Activating transcription factor 5
STMN2Stathmin-like 2 (SCG 10)
Iron metabolism:
HAMPHepcidin antimicrobial peptide
Oxidative stress:
CA9Carbonic anhydrase IX
CYP2E1Cytochrome P450 CYP2E1
Cell adhesion and cell junction:
ITGA2Integrin, alpha 2
Matrix proteases:
MMP9Matrix metalloproteinase 9
ANPEPAlanyl aminopeptidase (CD13)
CD14CD14 antigen
HLA-BMajor histocompatibility complex, class I, B
STXBP5Syntaxin-binding protein 5 (Tomosyn)
PIK3AP1Phosphoinositide-3-kinase adaptor protein 1
RPLP2Ribosomal protein large P2
RPS28Ribosomal protein S28
LAP3Leucine aminopeptidase 3
USP18Ubiquitin-specific protease 18