Probe set ID* | Gene symbol | Cohort A | Cohort B | Probe set ID | Gene symbol | Cohort A | Cohort B |
FC (R/NR) | FC (R/NR) | FC (R/NR) | FC (R/NR) | ||||
202422_s_at | ACSL4 | 0.30 | 0.33 | 229947_at | PI15 | 0.14 | 0.09 |
226517_at | BCAT1 | 0.39 | 0.47 | 220014_at | PRR16 | 0.39 | 0.42 |
204103_at | CCL4 | 0.38 | 0.39 | 1554997_a_at | PTGS2 | 0.21 | 0.12 |
219947_at | CLEC4A | 0.49 | 0.44 | 204748_at | PTGS2 | 0.22 | 0.13 |
231766_s_at | COL12A1 | 0.28 | 0.39 | 223809_at | RGS18 | 0.46 | 0.41 |
205159_at | CSF2RB | 0.42 | 0.42 | 209071_s_at | RGS5 | 0.46 | 0.49 |
214974_x_at | CXCL5 | 0.23 | 0.10 | 203535_at | S100A9 | 0.39 | 0.20 |
206336_at | CXCL6 | 0.22 | 0.25 | 220330_s_at | SAMSN1 | 0.35 | 0.43 |
207610_s_at | EMR2 | 0.40 | 0.37 | 1555638_a_at | SAMSN1 | 0.38 | 0.39 |
217967_s_at | FAM129A | 0.36 | 0.38 | 206211_at | SELE | 0.27 | 0.17 |
217966_s_at | FAM129A | 0.47 | 0.44 | 202627_s_at | SERPINE1 | 0.40 | 0.38 |
1554899_s_at | FCER1G | 0.42 | 0.39 | 202498_s_at | SLC2A3 | 0.41 | 0.31 |
203561_at | FCGR2A | 0.39 | 0.33 | 218404_at | SNX10 | 0.49 | 0.48 |
1554741_s_at | FGF7 | 0.33 | 0.38 | 227697_at | SOCS3 | 0.41 | 0.29 |
229435_at | GLIS3 | 0.41 | 0.43 | 201858_s_at | SRGN | 0.40 | 0.36 |
211959_at | IGFBP5 | 0.28 | 0.43 | 204597_x_at | STC1 | 0.26 | 0.24 |
203424_s_at | IGFBP5 | 0.45 | 0.34 | 230746_s_at | STC1 | 0.19 | 0.21 |
206420_at | IGSF6 | 0.48 | 0.35 | 204595_s_at | STC1 | 0.35 | 0.28 |
206924_at | IL11 | 0.13 | 0.17 | 229723_at | TAGAP | 0.30 | 0.24 |
206172_at | IL13RA2 | 0.22 | 0.20 | 210664_s_at | TFPI | 0.50 | 0.45 |
205207_at | IL6 | 0.22 | 0.17 | 209278_s_at | TFPI2 | 0.16 | 0.15 |
205798_at | IL7R | 0.45 | 0.49 | 210176_at | TLR1 | 0.41 | 0.32 |
210511_s_at | INHBA | 0.23 | 0.22 | 201645_at | TNC | 0.22 | 0.32 |
226001_at | KLHL5 | 0.39 | 0.49 | 204933_s_at | TNFRSF11B | 0.32 | 0.23 |
205269_at | LCP2 | 0.40 | 0.42 | 204932_at | TNFRSF11B | 0.28 | 0.24 |
229937_x_at | LILRB1 | 0.42 | 0.44 | 231227_at | WNT5A | 0.25 | 0.39 |
210146_x_at | LILRB2 | 0.33 | 0.26 | 205990_s_at | WNT5A | 0.28 | 0.32 |
206953_s_at | LPHN2 | 0.42 | 0.45 | 213425_at | WNT5A | 0.31 | 0.32 |
206584_at | LY96 | 0.38 | 0.46 | 232297_at | N/A | 0.44 | 0.49 |
220122_at | MCTP1 | 0.44 | 0.47 | 227140_at | N/A | 0.16 | 0.17 |
203434_s_at | MME | 0.33 | 0.39 | 209960_at | N/A | 0.42 | 0.43 |
205828_at | MMP3 | 0.25 | 0.30 | 242388_x_at | N/A | 0.42 | 0.37 |
224940_s_at | PAPPA | 0.39 | 0.39 | 229802_at | N/A | 0.33 | 0.28 |
228128_x_at | PAPPA | 0.35 | 0.38 | 226218_at | N/A | 0.41 | 0.46 |
224941_at | PAPPA | 0.39 | 0.43 | 226847_at | N/A | 0.36 | 0.37 |
203708_at | PDE4B | 0.41 | 0.31 | 226237_at | N/A | 0.36 | 0.32 |
211302_s_at | PDE4B | 0.44 | 0.29 | 209683_at | N/A | 0.44 | 0.47 |
*Full annotation for each probe set is given in supplementary table 1.
FC, fold change; LIMMA, linear models of microarray data; N/A, not available; NR, non-responders; R, responders.