Table 3

Species associated with high Firmicutes:Bacteroidetes (FB) ratio irritable bowel syndrome (IBS) versus control split

SpeciesControlsNormal-like IBSIBS cluster 1IBS cluster 2p Value
Most abundant in high FB ratio IBS-associated
Eubacterium hallii0.74 (0.42–1.2)0.91 (0.78–1.52)4.59 (2.24–7.08)0.97 (0.57–1.66)<0.0001
Clostridium innocuum0.0048 (0–0.0087)0.0078 (0.0034–0.0144)0.0428 (0.0242–0.0936)0 (0–0.004)<0.0001
Sporobacter termitidis*0.616 (0.179–1.02)0.448 (0.229–0.735)0.048 (0.009–0.327)1.48 (1.06–1.92)<0.01
Eubacterium desmolans0.095 (0.075–0.172)0.15 (0.053–0.258)0.398 (0.222–0.454)0.282 (0.133–0.767)<0.01
Eubacterium eligens0.483 (0.174–0.71)0.298 (0.015–0.834)0.0035 (0–0.0456)1.75 (0.0397–4.12)<0.01
Eubacterium siraeum*0.339 (0.028–1.16)0.285 (0.017–1.26)0.0043 (0–0.0182)0.457 (0.146–1.35)<0.01
Most abundant in control samples
Odoribacter splanchnicus0.26 (0.12–0.49)0.15 (0.068–0.27)0.007 (0–0.042)0.104 (0.045–0.22)<0.0001
Alistipes putredinis3.44 (2.03–6.31)2.79 (1.67–4.45)0.59 (0.007–1.55)0.503 (0.095–1.15)<0.001
Barnesiella intestinihominis0.87 (0.24–1.92)0.22 (0.007–0.489)0.0027 (0–0.243)0.26 (0.1–0.67)<0.001
Bacteroides caccae0.33 (0.1–1.05)0.28 (0.006–0.596)0 (0–0.052)0.1 (0.018–0.175)<0.01
Bacteroides stercoris0.025 (0.0014–0.7)0 (0–0.0037)0 (0–0)0 (0–0.0153)<0.01
  • Species showing significant differences in abundance across the four groups as defined from the Kruskal–Wallis analysis.

  • Values are shown as the median and associated IQR for the percentage of reads for the taxa in each group.

  • * Sporobacter termitidis and Eubacterium siraeum have both the highest and lowest values in the IBS clusters but are presented in this table as having their highest values in IBS cluster 2.