Table 3

nCounter validation of RNAseq data

Gene nameGene symbolMean read countsFold-changeFDRMean countsFold-changeFDR
Cadherin 1, type 1, E-cadherin (epithelial)CDH152201.80.00001***10 2831.80.0002***
CUGBP, Elav-like family member 1CELF15241.30.003**7681.50.0001***
Catenin (cadherin-associated protein), α 1CTNNA128751.50.002**46711.60.007**
Catenin (cadherin-associated protein), β 1CTNNB119981.40.01*58921.30.01**
F11 receptor (junction adhesion molecule 1)F11R (JAM1)30131.80.0001***24291.60.007**
Junction adhesion molecule 2JAM2119−1.30.03*2781.20.34
Junction adhesion molecule 3JAM3701.50.02*1131.30.06
Pleckstrin homology domain containing, family A member 7PLEKHA76921.80.002**4651.60.01**
  • p Values are adjusted for multiple testing correction by the Benjamini and Hochberg method. *<0.05; **<0.001; ***<0.0001.

  • FDR, false discovery rate; RNAseq, RNA sequencing.