InsertionsB128 single colonies7.13 single colonies7.13 iron-depleted single colonies7.13 iron-replete single colonies
LocationGeneHPB8 locusabcabcD1 aD1 bD1
C
D2 aD2 bD2 cD3 aD3 bD3 cR1 aR1 bR1 cR2 aR2 bR2 cR3 aR3 bR3 c
 88333Intergenic46403837334042453842385545403134313340
 88334Intergenic49465452
 102469Intergenic75
 132300Intergenic706563585552626650
 149625Intergenic52
 210808Intergenic50
 23605726896*
 293971Intergenic98949591959194949693969392969695939597959295
 397298 fucT1 42725*35*26*
 471641Intergenic1009597819793959292939893959495909495949394869391
 607701Intergenic63
 628559Intergenic2828
 631022Intergenic85698277848596919389948179100847678
 631033Intergenic90807783956273968678898787758778827896917984
 666812 nudT14 69194*93*99*
 759720Intergenic686665747274636370
 819619 oipA 83867*70*
 833169 fucT7 85463*66*65*
 883216 hyuA1 89593*99*98*
 8 83 595 hyuA1 895100*96*97*
 1064308 katA 1087100*
 1082193110392*97*
 1197192Intergenic424954
 1197193Intergenic50595759564857515254525555575157625562
 1217501Intergenic5853464453
 1332440Intergenic4550444847504648535744
 1332612135879*69*83.7-
84.8*
75*80*77*71.6–
72.5*
74*63*77*79*74.4–
75.6*
81*87*80*84*73*85*66*73*75*
 1414196144787*
 145819614845660 60
 1566403Intergenic4338364338373744
 1566404Intergenic5854 60 4548445946455355554744575149475857395953
 1621919166583*
 1657270Intergenic6674658062736172
 1657271Intergenic797676636070706760687063626069
  • D1-3 and R1-3 designate independent gerbils maintained on either iron-depleted (n=3) or iron-replete (n=3) diets, respectively, while a-c designate different single colonies isolated from each gerbil. Colour-coded regions within each single colony represent deletions or insertions that were present in each isolate, and the number in each box represents the percentage of reads that contained each single nucleotide polymorphism. When a percentage range is shown, this represents multinucleotide polymorphisms present.

  • *Deletion or insertion results in a frameshift mutation.