User profiles for "author:Luisa W Hugerth"

Luisa W. Hugerth

Imbim, Uppsala Univeristy
Verified email at scilifelab.se
Cited by 2852

[HTML][HTML] Analysing microbial community composition through amplicon sequencing: from sampling to hypothesis testing

LW Hugerth, AF Andersson - Frontiers in microbiology, 2017 - frontiersin.org
Microbial ecology as a scientific field is fundamentally driven by technological advance. The
past decade's revolution in DNA sequencing cost and throughput has made it possible for …

[HTML][HTML] The vaginal microbiome and the risk of preterm birth: a systematic review and network meta-analysis

U Gudnadottir, JW Debelius, J Du, LW Hugerth… - Scientific reports, 2022 - nature.com
Preterm birth is a major cause of neonatal morbidity and mortality worldwide. Increasing
evidence links the vaginal microbiome to the risk of spontaneous preterm labour that leads …

DegePrime, a program for degenerate primer design for broad-taxonomic-range PCR in microbial ecology studies

LW Hugerth, HA Wefer, S Lundin… - Applied and …, 2014 - Am Soc Microbiol
The taxonomic composition of a microbial community can be deduced by analyzing its rRNA
gene content by, eg, high-throughput DNA sequencing or DNA chips. Such methods …

[HTML][HTML] Colonization and succession within the human gut microbiome by archaea, bacteria, and microeukaryotes during the first year of life

L Wampach, A Heintz-Buschart, A Hogan… - Frontiers in …, 2017 - frontiersin.org
Perturbations to the colonization process of the human gastrointestinal tract have been
suggested to result in adverse health effects later in life. Although much research has been …

[HTML][HTML] Systematic design of 18S rRNA gene primers for determining eukaryotic diversity in microbial consortia

LW Hugerth, EEL Muller, YOO Hu, LAM Lebrun… - PloS one, 2014 - journals.plos.org
High-throughput sequencing of ribosomal RNA gene (rDNA) amplicons has opened up the
door to large-scale comparative studies of microbial community structures. The short reads …

[HTML][HTML] Metagenome-assembled genomes uncover a global brackish microbiome

LW Hugerth, J Larsson, J Alneberg, MV Lindh… - Genome biology, 2015 - Springer
Background Microbes are main drivers of biogeochemical cycles in oceans and lakes.
Although the genome is a foundation for understanding the metabolism, ecology and …

Enrichment of oral microbiota in early cystic precursors to invasive pancreatic cancer

RA Gaiser, A Halimi, H Alkharaan, L Lu, H Davanian… - Gut, 2019 - gut.bmj.com
Objectives Intraductal papillary mucinous neoplasms (IPMNs) are pancreatic cysts that can
progress to invasive pancreatic cancer. Associations between oncogenesis and oral …

Disentangling seasonal bacterioplankton population dynamics by high‐frequency sampling

MV Lindh, J Sjöstedt, AF Andersson… - Environmental …, 2015 - Wiley Online Library
Multiyear comparisons of bacterioplankton succession reveal that environmental conditions
drive community shifts with repeatable patterns between years. However, corresponding …

[HTML][HTML] Genomes from uncultivated prokaryotes: a comparison of metagenome-assembled and single-amplified genomes

J Alneberg, CMG Karlsson, AM Divne, C Bergin… - Microbiome, 2018 - Springer
Background Prokaryotes dominate the biosphere and regulate biogeochemical processes
essential to all life. Yet, our knowledge about their biology is for the most part limited to the …

The healthy female microbiome across body sites: effect of hormonal contraceptives and the menstrual cycle

MC Krog, LW Hugerth, E Fransson, Z Bashir… - Human …, 2022 - academic.oup.com
STUDY QUESTION How does hormonal contraceptive use and menstrual cycle phase affect
the female microbiome across different body sites? SUMMARY ANSWER The menstrual …